Sam_g32598


Description : not classified & original description: none


Gene families : OG0000298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g32598
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Adi_g046116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01043.t1 Aspi01Gene01043 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21566.t1 Aspi01Gene21566 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22883.t1 Aspi01Gene22883 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28657.t1 Aspi01Gene28657 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31199.t1 Aspi01Gene31199 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35232.t1 Aspi01Gene35232 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene41989.t1 Aspi01Gene41989 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44965.t1 Aspi01Gene44965 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57875.t1 Aspi01Gene57875 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z189400.1 Ceric.1Z189400 not classified & original description: pacid=50637395... 0.02 OrthoFinder output from all 47 species
Dde_g26747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51922 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g29934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08317 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_24565 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_25910 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g10484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g00524 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g01271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g01324 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g02361 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03792 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09352 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g10448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11591 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g15663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23901 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g26030 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g29913 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g29915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g32884 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g34448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48988 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g52764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g42504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009190 cyclic nucleotide biosynthetic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041373 RT_RNaseH 37 104
No external refs found!