Description : not classified & original description: none
Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G27860 | No alias | Tudor/PWWP/MBT superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Aob_g17586 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g04914 | No alias | N-methyltransferase component *(ATX3/4/5) of COMPASS... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene63312.t1 | Aspi01Gene63312 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g07712 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G099500.1 | Ceric.04G099500 | not classified & original description: pacid=50631612... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021037.72 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Dac_g32171 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g06515 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01016344001 | No alias | Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01031118001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01032455001 | No alias | Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Gb_40891 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g38810.1 | LOC_Os05g38810 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g19810.1 | LOC_Os11g19810 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Len_g12919 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g20479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g30998 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g33929 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_137318g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_8546g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g43747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g13020 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g16152 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g06451 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g06983 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g22851 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Solyc01g099360.3.1 | Solyc01g099360 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027258_P002 | Zm00001e027258 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031849_P002 | Zm00001e031849 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005685 | U1 snRNP | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
CC | GO:0070939 | Dsl1/NZR complex | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000313 | PWWP_dom | 493 | 576 |
No external refs found! |