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Description : component *(PsaO) of PS-I complex & original description: none
Gene families : OG0006664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006664_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g30018 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00018p00092490 | PSAO,... | Photosynthesis.photophosphorylation.photosystem I.PS-I... | 0.09 | OrthoFinder output from all 47 species | |
| AT1G08380 | PSAO | photosystem I subunit O | 0.16 | OrthoFinder output from all 47 species | |
| Aev_g48685 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Aob_g41969 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene33467.t1 | PSAO, Aspi01Gene33467 | component *(PsaO) of PS-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036525 | PSAO | component *(PsaO) of PS-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G021300.1 | PSAO, Ceric.30G021300 | component *(PsaO) of PS-I complex & original... | 0.13 | OrthoFinder output from all 47 species | |
| Cre07.g334550 | PSAO | Photosynthesis.photophosphorylation.photosystem I.PS-I... | 0.12 | OrthoFinder output from all 47 species | |
| Dcu_g00367 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dde_g21922 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g00560 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01036077001 | PSAO | Photosynthesis.photophosphorylation.photosystem I.PS-I... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_21299 | PSAO | component PsaO of PS-I complex | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os04g33830.1 | PSAO, LOC_Os04g33830 | component PsaO of PS-I complex | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g36346 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| MA_893g0010 | PSAO | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Mp8g01210.1 | PSAO | component PsaO of PS-I complex | 0.13 | OrthoFinder output from all 47 species | |
| Msp_g09112 | PSAO | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g10106 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g44306 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g05428 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g20184 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30709 | No alias | component *(PsaO) of PS-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00362 | No alias | component *(PsaO) of PS-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0102.g019936 | PSAO | circadian clock activation factor *(LWD) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Smo104218 | PSAO | Photosynthesis.photophosphorylation.photosystem I.PS-I... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g074200.4.1 | PSAO, Solyc06g074200 | component PsaO of PS-I complex | 0.14 | OrthoFinder output from all 47 species | |
| Spa_g11754 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g11755 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g00203 | PSAO | component *(PsaO) of PS-I complex & original description: none | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |