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  5. Sam_g29945

Sam_g29945


Description : not classified & original description: none


Gene families : OG0003125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29945

Target Alias Description ECC score Gene Family Method Actions
AT1G42470 No alias Patched family protein 0.02 OrthoFinder output from all 47 species
AT4G38350 No alias Patched family protein 0.02 OrthoFinder output from all 47 species
Ceric.16G076200.1 Ceric.16G076200 not classified & original description: pacid=50589693... 0.04 OrthoFinder output from all 47 species
Cre12.g550900 No alias No description available 0.02 OrthoFinder output from all 47 species
Mp6g18250.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g47796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011487 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR032190 NPC1_N 34 267
IPR003392 Ptc/Disp 533 891
IPR003392 Ptc/Disp 1055 1262
No external refs found!