Sam_g29111


Description : not classified & original description: none


Gene families : OG0008495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008495_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29111
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT1G02180 No alias ferredoxin-related 0.02 OrthoFinder output from all 47 species
Adi_g024625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06372 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g01159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03309 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g58740.1 LOC_Os02g58740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g35710.1 LOC_Os08g35710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g02111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_456304g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g08223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g063740.2.1 Solyc07g063740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e022206_P001 Zm00001e022206 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!