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  5. Sam_g28760

Sam_g28760


Description : calcium sensor *(CBL) & original description: none


Gene families : OG0000287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28760

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00174540 ATCBL1, CBL1,... Calcineurin B-like protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g62755 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23716 CBL4, ATSOS3, SOS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14439.t1 CBL9, ATCBL9,... calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30045.t1 CBL9, ATCBL9,... calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71124.t1 CBL9, ATCBL9,... calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G057800.1 CBL2, ATCBL2,... calcium sensor *(CBL) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g06456 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02977 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09893 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15874 ATCBL1, CBL1, SCABP5 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025366 ATCBL1, CBL1, SCABP5 calcium sensor *(CBL) & original description: CDS=309-836 0.03 OrthoFinder output from all 47 species
Sam_g28759 No alias calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g065330.3.1 CBL10, SCABP8,... calcium-dependent regulatory protein SCaBP8/CBL10 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008915 lipid-A-disaccharide synthase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 117 186
No external refs found!