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  5. Sam_g28574

Sam_g28574


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28574

Target Alias Description ECC score Gene Family Method Actions
Azfi_s1785.g106751 RSW3, PSL5 EC_3.2 glycosylase & original description: CDS=1209-2918 0.03 OrthoFinder output from all 47 species
Zm00001e009572_P003 HGL1, Zm00001e009572 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR033403 DUF5110 790 847
IPR000322 Glyco_hydro_31 327 771
IPR025887 Glyco_hydro_31_N_dom 218 292
No external refs found!