Sam_g28344

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g28344
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AT1G69310	ATWRKY57, WRKY57	WRKY DNA-binding protein 57	0.02	OrthoFinder output from all 47 species
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.02	OrthoFinder output from all 47 species
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.02	OrthoFinder output from all 47 species
AT5G01900	WRKY62, ATWRKY62	WRKY DNA-binding protein 62	0.02	OrthoFinder output from all 47 species
AT5G64810	ATWRKY51, WRKY51	WRKY DNA-binding protein 51	0.02	OrthoFinder output from all 47 species
Ala_g05188	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g33662	WRKY26	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g42426	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene52703.t1	ATWRKY50,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52849.t2	Aspi01Gene52849	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60875.t1	WRKY3, Aspi01Gene60875	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene61067.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene64693.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65372.t1	WRKY75,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65373.t1	WRKY26, Aspi01Gene65373	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0052.g031586	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: CDS=1-864	0.04	OrthoFinder output from all 47 species
Cba_g24685	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z119500.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.25G052100.1	WRKY42,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G073300.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.39G056400.1	WRKY26, Ceric.39G056400	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g39335	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g06149	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g06370	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g11035	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g14822	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g18753	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18481	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g19263	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27429	WRKY72, ATWRKY72	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g31501	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01022259001	ATWRKY13, WRKY13	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01029688001	WRKY9, ATWRKY9	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01034148001	WRKY49, ATWRKY49	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
LOC_Os04g46060.1	LOC_Os04g46060	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os06g44010.1	WRKY18,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os11g29870.1	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os12g32250.1	WRKY3, LOC_Os12g32250	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g19187	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g28971	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g40222	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g41417	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10428091g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
MA_381058g0010	WRKY18, ATWRKY18	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Mp1g08960.1	WRKY53, ATWRKY53	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Mp1g24950.1	ATWRKY64, WRKY64	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Mp7g06550.1	ATWRKY57, WRKY57	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Ore_g09070	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g10933	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g16460	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19872	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g16309	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pp3c22_12880V3.1	ATWRKY50,...	WRKY DNA-binding protein 48	0.01	OrthoFinder output from all 47 species
Sam_g22459	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g50657	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g056280.3.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc12g006170.2.1	AtWRKY20,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Tin_g20270	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g42764	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g44569	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007834_P002	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e015980_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e017439_P001	AtWRKY47,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e018502_P001	WRKY49,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	371	427
IPR003657	WRKY_dom	193	250

External Links

No external refs found!

Sam_g28344

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation