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  5. Sam_g27150

Sam_g27150


Description : microtubule-stabilizing factor *(WDL) & original description: none


Gene families : OG0000418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27150

Target Alias Description ECC score Gene Family Method Actions
AT2G25480 No alias TPX2 (targeting protein for Xklp2) protein family 0.02 OrthoFinder output from all 47 species
Ala_g25469 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11564.t1 Aspi01Gene11564 microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42236.t1 Aspi01Gene42236 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60353.t1 Aspi01Gene60353 microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g27660 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.37G023300.1 Ceric.37G023300 microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Dac_g22186 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g03076 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g11946 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g22116 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g07182 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g12050 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04655 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06051 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Gb_32183 No alias microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
LOC_Os07g08790.1 LOC_Os07g08790 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
LOC_Os11g36340.1 LOC_Os11g36340 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Len_g01303 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Len_g48036 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g02037 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
MA_20109g0010 No alias microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
MA_46848g0010 No alias microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Mp7g06100.1 No alias microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Msp_g09168 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g24171 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g01348 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009920 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014818 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Spa_g30104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30848 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Tin_g10441 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Tin_g13057 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e006019_P002 Zm00001e006019 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Zm00001e011856_P006 Zm00001e011856 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Zm00001e037428_P003 Zm00001e037428 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 263 338
No external refs found!