1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g28056

Lfl_g28056


Description : regulatory protein *(SCAB) of actin organisation & original description: none


Gene families : OG0004003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004003_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28056

Target Alias Description ECC score Gene Family Method Actions
Ore_g09366 No alias regulatory protein *(SCAB) of actin organisation &... 0.02 OrthoFinder output from all 47 species
Zm00001e019527_P002 Zm00001e019527 SCAB actin organisation regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e035697_P001 Zm00001e035697 SCAB actin organisation regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e038157_P004 Zm00001e038157 SCAB actin organisation regulator protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR041144 SCAB-PH 378 450
IPR032009 SCAB_CC 95 262
IPR032012 SCAB-ABD 46 91
No external refs found!