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  5. Sam_g26354

Sam_g26354


Description : component *(PsaH) of PS-I complex & original description: none


Gene families : OG0003597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26354
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00068030 PSAH-1,... Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.08 OrthoFinder output from all 47 species
AT1G52230 PSAH2, PSI-H, PSAH-2 photosystem I subunit H2 0.11 OrthoFinder output from all 47 species
AT3G16140 PSAH-1 photosystem I subunit H-1 0.1 OrthoFinder output from all 47 species
Adi_g089037 PSAH-1 component *(PsaH) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g089038 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g41504 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46202 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Als_g00197 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g00740 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04596 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13199 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10180 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene43407.t1 PSAH2, PSI-H,... component *(PsaH) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.1Z046000.1 PSAH2, PSI-H,... component *(PsaH) of PS-I complex & original... 0.09 OrthoFinder output from all 47 species
Cre07.g330250 PSAH2, PSI-H, PSAH-2 Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.12 OrthoFinder output from all 47 species
Dac_g00191 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g26886 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g38268 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g50737 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g02562 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00597 PSAH-1 component *(PsaH) of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01017071001 PSAH2, PSI-H, PSAH-2 Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.05 OrthoFinder output from all 47 species
Gb_06981 PSAH2, PSI-H, PSAH-2 component PsaH of PS-I complex 0.07 OrthoFinder output from all 47 species
Len_g17017 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g03653 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
MA_65259g0010 PSAH2, PSI-H, PSAH-2 component PsaH of PS-I complex 0.08 OrthoFinder output from all 47 species
Mp7g13220.1 PSAH2, PSI-H, PSAH-2 component PsaH of PS-I complex 0.11 OrthoFinder output from all 47 species
Msp_g10472 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35384 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03954 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g04857 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g56895 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g29155 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59121 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g120640.3.1 PSAH-1, Solyc03g120640 component PsaH of PS-I complex 0.12 OrthoFinder output from all 47 species
Solyc06g066640.3.1 PSAH-1, Solyc06g066640 component PsaH of PS-I complex 0.08 OrthoFinder output from all 47 species
Solyc12g044280.2.1 PSAH2, PSI-H,... component PsaH of PS-I complex 0.14 OrthoFinder output from all 47 species
Spa_g28227 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g52390 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11382 PSAH2, PSI-H, PSAH-2 component *(PsaH) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e032403_P001 PSAH2, PSI-H,... component PsaH of PS-I complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004928 PSI_PsaH 5 112
No external refs found!