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  5. Sam_g24671

Sam_g24671


Description : not classified & original description: none


Gene families : OG0007064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24671

Target Alias Description ECC score Gene Family Method Actions
AT5G47860 No alias Protein of unknown function (DUF1350) 0.03 OrthoFinder output from all 47 species
Als_g18750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001142001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g33280.1 LOC_Os04g33280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g12393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g008070.3.1 Solyc01g008070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e008248_P001 Zm00001e008248 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR010765 DUF1350 1 262
No external refs found!