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Description : not classified & original description: none
Gene families : OG0004459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004459_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G33435 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g108728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13459 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09620 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene59651.t1 | Aspi01Gene59651 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0017.g014511 | No alias | not classified & original description: CDS=1-3180 | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g32468 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38756 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g21118 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027871001 | No alias | Splicing factor U2af large subunit A OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32245 | No alias | Splicing factor U2af large subunit A OS=Triticum... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g04520.2 | LOC_Os03g04520 | Splicing factor U2af large subunit B OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38674 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_176544g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07673 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g090420.4.1 | Solyc09g090420 | Splicing factor U2af large subunit B OS=Oryza sativa... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e038951_P001 | Zm00001e038951 | Splicing factor U2af large subunit A OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |