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  5. Sam_g24409

Sam_g24409


Description : protein disulfide isomerase *(PDI-S) & original description: none


Gene families : OG0002730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24409
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00073380 MEE30, ATPDI11,... Protein disulfide isomerase-like 2-2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT2G47470 MEE30, ATPDI11,... thioredoxin family protein 0.03 OrthoFinder output from all 47 species
Adi_g080975 MEE30, ATPDI11,... protein disulfide isomerase *(PDI-S) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20651 MEE30, ATPDI11,... protein disulfide isomerase *(PDI-S) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07380 MEE30, ATPDI11,... protein disulfide isomerase *(PDI-S) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22511 MEE30, ATPDI11,... protein disulfide isomerase *(PDI-S) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g06430.1 MEE30, ATPDI11,... Protein disulfide isomerase-like 2-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g56716 MEE30, ATPDI11,... protein disulfide isomerase *(PDI-S) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12488 MEE30, ATPDI11,... protein disulfide isomerase *(PDI-S) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02227 MEE30, ATPDI11,... protein disulfide isomerase *(PDI-S) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04373 MEE30, ATPDI11,... protein disulfide isomerase *(PDI-S) & original description: none 0.02 OrthoFinder output from all 47 species
Smo268311 MEE30, ATPDI11,... Probable protein disulfide-isomerase A6 OS=Medicago sativa 0.03 OrthoFinder output from all 47 species
Zm00001e017599_P001 MEE30, ATPDI11,... Protein disulfide isomerase-like 2-2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e031143_P002 MEE30, ATPDI11,... Protein disulfide isomerase-like 2-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 146 249
IPR013766 Thioredoxin_domain 28 130
IPR011679 ERp29_C 267 360
No external refs found!