Sam_g22353


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g22353

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00208300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g24154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g15700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027258_P002 Zm00001e027258 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!