Sam_g20358

Description : component *(eL36) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g20358
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00179170	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
AT2G37600	No alias	Ribosomal protein L36e family protein	0.02	OrthoFinder output from all 47 species
AT3G53740	No alias	Ribosomal protein L36e family protein	0.03	OrthoFinder output from all 47 species
AT5G02450	No alias	Ribosomal protein L36e family protein	0.03	OrthoFinder output from all 47 species
Adi_g022992	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Adi_g067485	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aop_g16043	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g32159	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cba_g63416	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021493.69	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Cre12.g484050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Dcu_g27541	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dcu_g50228	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01028917001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Gb_27261	No alias	component RPL36 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os05g38520.1	LOC_Os05g38520	component RPL36 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Lfl_g33447	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
MA_10430792g0010	No alias	component RPL36 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Mp1g05460.1	No alias	component RPL36 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Msp_g00137	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Msp_g37785	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Nbi_g39400	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g07917	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c14_19960V3.1	Pp3c14_19960	Ribosomal protein L36e family protein	0.03	OrthoFinder output from all 47 species
Pp3c1_32310V3.1	Pp3c1_32310	Ribosomal protein L36e family protein	0.03	OrthoFinder output from all 47 species
Sam_g23315	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g23546	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g31192	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g37066	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g46575	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Solyc03g025520.4.1	Solyc03g025520	component RPL36 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g44897	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e027238_P001	Zm00001e027238	component RPL36 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
CC	GO:0045277	respiratory chain complex IV	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000509	Ribosomal_L36e	12	106

External Links

No external refs found!

Sam_g20358

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation