Description : component *(bS20c) of small plastid ribosomal-subunit proteome & original description: none
Gene families : OG0006775 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006775_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00068p00188920 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
AT3G15190 | No alias | chloroplast 30S ribosomal protein S20, putative | 0.08 | OrthoFinder output from all 47 species | |
Adi_g045230 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g22835 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g08893 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Als_g08208 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g06235 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g03027 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0228.g059056 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.11G009600.1 | Ceric.11G009600 | component *(bS20c) of small plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
Cre12.g494750 | No alias | Protein biosynthesis.organelle translation... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g10899 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g37258 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g15842 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g11872 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01014290001 | No alias | Protein biosynthesis.organelle translation... | 0.11 | OrthoFinder output from all 47 species | |
Gb_27504 | No alias | component psRPS20 of small ribosomal subunit proteome | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os01g48690.1 | LOC_Os01g48690 | component psRPS20 of small ribosomal subunit proteome | 0.12 | OrthoFinder output from all 47 species | |
Len_g00203 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g00868 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
MA_872747g0010 | No alias | component psRPS20 of small ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species | |
Mp7g14740.1 | No alias | component psRPS20 of small ribosomal subunit proteome | 0.15 | OrthoFinder output from all 47 species | |
Nbi_g03416 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Ore_g04849 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g10569 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g26924 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0024.g009139 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g062870.3.1 | Solyc07g062870 | component psRPS20 of small ribosomal subunit proteome | 0.08 | OrthoFinder output from all 47 species | |
Spa_g08226 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Spa_g08227 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Spa_g50703 | No alias | component *(bS20c) of small plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
Zm00001e028066_P001 | Zm00001e028066 | component psRPS20 of small ribosomal subunit proteome | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0016790 | thiolester hydrolase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002583 | Ribosomal_S20 | 73 | 159 |
No external refs found! |