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  5. Sam_g19951

Sam_g19951


Description : subunit theta *(CCT8) of CCT chaperonin folding complex & original description: none


Gene families : OG0006803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19951

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00079950 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
AT3G03960 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Ala_g08900 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Aob_g12737 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Aop_g12393 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Ceric.23G020400.1 Ceric.23G020400 subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.20 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Cre03.g168450 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Dcu_g02964 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01033394001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
LOC_Os03g59020.1 LOC_Os03g59020 CCT8 subunit theta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
MA_100776g0010 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Mp6g01500.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Ore_g16783 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Pir_g00611 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Smo143104 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Solyc01g088080.3.1 Solyc01g088080 CCT8 subunit theta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Spa_g04596 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Tin_g01051 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Zm00001e011242_P002 Zm00001e011242 CCT8 subunit theta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Zm00001e024443_P002 Zm00001e024443 CCT8 subunit theta of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 38 528
No external refs found!