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  5. Sam_g19458

Sam_g19458


Description : E3 ubiquitin ligase *(SAUL) & original description: none


Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19458

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00145170 PUB44, SAUL1,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Aev_g09177 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02433 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03245 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036412 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=255-3365 0.03 OrthoFinder output from all 47 species
Azfi_s0111.g045660 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=666-3779 0.03 OrthoFinder output from all 47 species
Azfi_s0373.g067169 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=299-2836 0.03 OrthoFinder output from all 47 species
Dcu_g03175 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010123001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Nbi_g39046 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g082570.3.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Zm00001e039535_P001 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 899 935
IPR003613 Ubox_domain 257 331
No external refs found!