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  5. Sam_g19431

Sam_g19431


Description : not classified & original description: none


Gene families : OG0000135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19431

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene47576.t1 Aspi01Gene47576 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15130 No alias no description available(sp|a0a1s3thr8|phbp_vigrr : 114.0) 0.03 OrthoFinder output from all 47 species
MA_8819148g0010 No alias Pathogenesis-related protein 1 OS=Asparagus officinalis... 0.02 OrthoFinder output from all 47 species
Pir_g16721 MLP43 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016799 No alias not classified & original description: CDS=689-1198 0.02 OrthoFinder output from all 47 species
Smo411659 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc09g090990.2.1 Solyc09g090990 Pathogenesis-related protein STH-2 OS=Solanum tuberosum... 0.03 OrthoFinder output from all 47 species
Spa_g09780 MLP43 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR019587 Polyketide_cyclase/dehydratase 6 158
No external refs found!