Sam_g18859


Description : not classified & original description: none


Gene families : OG0006166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006166_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18859
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00231690 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g018653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G019700.1 Ceric.11G019700 not classified & original description: pacid=50595415... 0.02 OrthoFinder output from all 47 species
Dac_g08654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41241 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g16662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23601 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10338 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g45674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR009688 FAM210A/B-like_dom 97 178
No external refs found!