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  5. Sam_g18417

Sam_g18417


Description : histone chaperone *(NRP) & original description: none


Gene families : OG0001637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18417

Target Alias Description ECC score Gene Family Method Actions
AT1G18800 NRP2 NAP1-related protein 2 0.06 OrthoFinder output from all 47 species
AT1G74560 NRP1 NAP1-related protein 1 0.03 OrthoFinder output from all 47 species
Aev_g07051 NRP2 histone chaperone *(NRP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14730 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03073 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30633.t2 NRP2, Aspi01Gene30633 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31912.t1 NRP2, Aspi01Gene31912 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008382 NRP2 histone chaperone *(NRP) & original description: CDS=246-1052 0.07 OrthoFinder output from all 47 species
Cba_g32793 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G055400.1 NRP2, Ceric.15G055400 histone chaperone *(NRP) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.22G058200.1 NRP2, Ceric.22G058200 histone chaperone *(NRP) & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g03235 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32489 NRP2 histone chaperone *(NRP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008022001 NRP2 NAP1-related protein 2 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_17405 NRP2 histone chaperone (NRP) 0.02 OrthoFinder output from all 47 species
Gb_36879 NRP2 histone chaperone (NRP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g36710.1 NRP2, LOC_Os02g36710 histone chaperone (NRP) 0.02 OrthoFinder output from all 47 species
MA_10427220g0020 NRP2 histone chaperone (NRP) 0.02 OrthoFinder output from all 47 species
MA_25056g0010 NRP2 histone chaperone (NRP) 0.1 OrthoFinder output from all 47 species
Mp3g22840.1 NRP2 histone chaperone (NRP) 0.04 OrthoFinder output from all 47 species
Nbi_g04720 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44317 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12087 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g116170.3.1 NRP2, Solyc03g116170 histone chaperone (NRP) 0.07 OrthoFinder output from all 47 species
Solyc06g069890.4.1 NRP2, Solyc06g069890 histone chaperone (NRP) 0.04 OrthoFinder output from all 47 species
Spa_g11282 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21073 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28979 NRP2 histone chaperone *(NRP) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g41847 NRP2 histone chaperone *(NRP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g43361 NRP1 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05423 NRP2 histone chaperone *(NRP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014912_P001 NRP2, Zm00001e014912 histone chaperone (NRP) 0.02 OrthoFinder output from all 47 species
Zm00001e022803_P001 NRP2, Zm00001e022803 histone chaperone (NRP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002164 NAP_family 27 72
IPR002164 NAP_family 71 220
No external refs found!