Sam_g18356

Description : EC_3.2 glycosylase & original description: none

Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g18356

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00150440	BMY8, BAM3,...	Carbohydrate metabolism.starch...	0.02	OrthoFinder output from all 47 species
AMTR_s00057p00154460	BAM9, BMY3,...	Carbohydrate metabolism.starch...	0.02	OrthoFinder output from all 47 species
AMTR_s00098p00153370	RAM1, BMY1,...	Carbohydrate metabolism.starch...	0.02	OrthoFinder output from all 47 species
AT3G23920	BAM1, BMY7, TR-BAMY	beta-amylase 1	0.02	OrthoFinder output from all 47 species
Adi_g024852	BMY5, BAM6	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g07035	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12183.t1	BMY5, BAM6,...	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene25032.t1	BAM1, BMY7,...	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g27805	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g22861	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g07345	No alias	EC_3.2 glycosylase & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g02124	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	1	426

External Links

No external refs found!