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  5. Sam_g17729

Sam_g17729


Description : EC_3.1 hydrolase acting on ester bond & original description: none


Gene families : OG0000848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17729
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00165p00079470 TOPP4,... Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
AT4G11240 TOPP7 Calcineurin-like metallo-phosphoesterase superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g10735 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g11209 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g21389 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001362 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G024000.1 TOPP4, Ceric.25G024000 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Cre06.g292550 TOPP4 Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
GSVIVT01019425001 TOPP7 Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Gb_14580 TOPP7 PP1 phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os08g35440.1 TOPP4, LOC_Os08g35440 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Len_g13523 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Len_g48225 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023583 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g26383 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Solyc06g053630.3.1 TOPP4, Solyc06g053630 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Solyc09g090060.3.1 TOPP4, Solyc09g090060 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Spa_g21850 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004036_P002 TOPP2, PPO,... PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e016250_P003 TOPP4, Zm00001e016250 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e023587_P002 TOPP4, Zm00001e023587 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e026245_P001 Zm00001e026245 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e026746_P001 Zm00001e026746 PP1 phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR031675 STPPase_N 6 53
IPR004843 Calcineurin-like_PHP_ApaH 55 247
No external refs found!