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  5. Sam_g17254

Sam_g17254


Description : not classified & original description: none


Gene families : OG0008626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00260200 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G12800 No alias Nucleic acid-binding, OB-fold-like protein 0.03 OrthoFinder output from all 47 species
Adi_g058535 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g12369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G040000.1 Ceric.34G040000 not classified & original description: pacid=50623148... 0.02 OrthoFinder output from all 47 species
Dac_g13586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019806001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g02390.1 LOC_Os02g02390 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g04234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp2g11640.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g05908 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g007950.3.1 Solyc08g007950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013455_P001 Zm00001e013455 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 743 814
No external refs found!