Sam_g17104

Description : plastidic signal peptidase *(PLSP/TPP) & original description: none

Gene families : OG0000723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17104

Target	Alias	Description	ECC score	Gene Family Method
Als_g06644	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Aop_g02908	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene45190.t2	PLSP1, Aspi01Gene45190	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Cba_g16382	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.03	OrthoFinder output from all 47 species
Ceric.13G077100.1	PLSP1, Ceric.13G077100	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Dac_g13435	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g20568	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.04	OrthoFinder output from all 47 species
Dde_g22325	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.04	OrthoFinder output from all 47 species
Dde_g25309	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01008821001	TPP	Protein modification.peptide maturation.plastid.PLSP/TPP...	0.04	OrthoFinder output from all 47 species
LOC_Os09g28000.1	LOC_Os09g28000	plastidic signal peptidase (PLSP/TPP)	0.02	OrthoFinder output from all 47 species
Lfl_g20986	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g21310	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Pir_g26204	No alias	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g12469	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g55540	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Sam_g14829	No alias	plastidic signal peptidase *(PLSP/TPP) & original...	0.03	OrthoFinder output from all 47 species
Sam_g16230	No alias	plastidic signal peptidase *(PLSP/TPP) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
BP	GO:0006465	signal peptide processing	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
BP	GO:0016485	protein processing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004664	prephenate dehydratase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006558	L-phenylalanine metabolic process	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	HCCA
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	HCCA
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019533	Peptidase_S26	246	402

External Links

No external refs found!

Sam_g17104

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation