Sam_g16901

Description : plastidic signal peptidase *(PLSP/TPP) & original description: none

Gene families : OG0000723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g16901

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00050280	PLSP1,...	Protein modification.peptide maturation.plastid.PLSP/TPP...	0.02	OrthoFinder output from all 47 species
Als_g21840	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.03	OrthoFinder output from all 47 species
Ceric.10G075600.1	PLSP1, Ceric.10G075600	plastidic signal peptidase *(PLSP/TPP) & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01015377001	PLSP1	Protein modification.peptide maturation.plastid.PLSP/TPP...	0.02	OrthoFinder output from all 47 species
Ppi_g32625	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008016	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Spa_g48994	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Tin_g11027	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
BP	GO:0006465	signal peptide processing	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
BP	GO:0016485	protein processing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005542	folic acid binding	IEP	HCCA
BP	GO:0010257	NADH dehydrogenase complex assembly	IEP	HCCA
BP	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly	IEP	HCCA
BP	GO:0010275	NAD(P)H dehydrogenase complex assembly	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
MF	GO:0072341	modified amino acid binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019533	Peptidase_S26	144	300

External Links

No external refs found!