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  5. Sam_g16822

Sam_g16822


Description : component *(IES2) of INO80 chromatin remodeling complex & original description: none


Gene families : OG0002110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16822

Target Alias Description ECC score Gene Family Method Actions
Als_g15896 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Aob_g40727 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Aop_g04457 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Dde_g25145 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Ehy_g23608 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
LOC_Os12g37430.1 LOC_Os12g37430 component IES2 of INO80 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Lfl_g07056 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Pir_g15688 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Sam_g26861 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Solyc01g079350.3.1 Solyc01g079350 component IES2 of INO80 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031011 Ino80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003937 IMP cyclohydrolase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006880 INO80B_C 547 631
IPR007529 Znf_HIT 648 678
No external refs found!