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  5. Sam_g16170

Sam_g16170


Description : not classified & original description: none


Gene families : OG0001929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16170

Target Alias Description ECC score Gene Family Method Actions
Aev_g35568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G031600.1 Ceric.17G031600 not classified & original description: pacid=50618506... 0.05 OrthoFinder output from all 47 species
Dcu_g02025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031010001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031214001 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g03463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g14750.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pp3c23_2250V3.1 Pp3c23_2250 No annotation 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018085 No alias not classified & original description: CDS=53-2638 0.03 OrthoFinder output from all 47 species
Tin_g09157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 869 964
IPR032795 DUF3741-assoc 102 123
No external refs found!