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  5. Sam_g15439

Sam_g15439


Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0003047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15439

Target Alias Description ECC score Gene Family Method Actions
AT2G45440 DHDPS2 dihydrodipicolinate synthase 0.02 OrthoFinder output from all 47 species
Adi_g109148 DHDPS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00822 DHDPS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29531 DHDPS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37452 DHDPS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g107300 DHDPS2 Amino acid metabolism.biosynthesis.aspartate... 0.03 OrthoFinder output from all 47 species
Dcu_g06895 DHDPS, DHDPS1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027627001 DHDPS2 Amino acid metabolism.biosynthesis.aspartate... 0.02 OrthoFinder output from all 47 species
Len_g02739 DHDPS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g21410.1 DHDPS, DHDPS1 hydroxy-tetrahydrodihydrodipicolinate synthase 0.03 OrthoFinder output from all 47 species
Pir_g10713 DHDPS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14772 DHDPS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_3950V3.1 DHDPS2, Pp3c6_3950 dihydrodipicolinate synthase 0.01 OrthoFinder output from all 47 species
Spa_g16538 DHDPS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002220 DapA-like 60 331
No external refs found!