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  5. Sam_g14961

Sam_g14961


Description : not classified & original description: none


Gene families : OG0002241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14961

Target Alias Description ECC score Gene Family Method Actions
Adi_g006702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020652001 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g01863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426278g0010 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp3g14150.1 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g03554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000640 EFG_V-like 459 542
IPR000795 T_Tr_GTP-bd_dom 56 254
IPR004161 EFTu-like_2 278 351
No external refs found!