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  5. Sam_g14910

Sam_g14910


Description : EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor & original description: none


Gene families : OG0001498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001498_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14910
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263260 P5CS1, ATP5CS,... Amino acid metabolism.biosynthesis.glutamate... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63088.t1 P5CS1, ATP5CS,... EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63089.t1 P5CS2, Aspi01Gene63089 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
Cba_g64149 P5CS2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
Ceric.29G053100.1 P5CS2, Ceric.29G053100 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species
MA_10432996g0010 P5CS1, ATP5CS pyrroline-5-carboxylate synthetase 0.01 OrthoFinder output from all 47 species
Ore_g43202 P5CS2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0176.g024621 P5CS2 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001048 Asp/Glu/Uridylate_kinase 13 257
IPR015590 Aldehyde_DH_dom 288 554
No external refs found!