Description : RNA splicing factor *(SR30/34) & original description: none
Gene families : OG0001059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001059_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00100p00047650 | At-SR34a, SR34a,... | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
Als_g20395 | SR30, ATSRP30, At-SR30 | RNA splicing factor *(SR30/34) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G062100.1 | SR30, ATSRP30,... | RNA splicing factor *(SR30/34) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.23G039200.1 | At-SR34a, SR34a,... | RNA splicing factor *(SR30/34) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g36549 | SR30, ATSRP30, At-SR30 | RNA splicing factor *(SR30/34) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027997001 | At-SR34, SRP34,... | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g22380.1 | At-SR34, SRP34,... | SR30/34 RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
Len_g20957 | SR30, ATSRP30, At-SR30 | RNA splicing factor *(SR30/34) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g48587 | SR30, ATSRP30, At-SR30 | RNA splicing factor *(SR30/34) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_141465g0010 | SR30, ATSRP30, At-SR30 | SR30/34 RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
MpVg00980.1 | At-SR34a, SR34a, SRp34a | No annotation | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g02953 | SR30, ATSRP30, At-SR30 | RNA splicing factor *(SR30/34) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
No external refs found! |