Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G26880 | No alias | Ribosomal protein L34e superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G69620 | RPL34 | ribosomal protein L34 | 0.02 | OrthoFinder output from all 47 species | |
AT3G28900 | No alias | Ribosomal protein L34e superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0094.g043410 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0225.g058934 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.34G068800.1 | Ceric.34G068800 | component *(eL34) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000632.3 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g661050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g20175 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g27998 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01019985001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Gb_36060 | No alias | component RPL34 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g06040.1 | LOC_Os08g06040 | component RPL34 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g33920.1 | LOC_Os08g33920 | component RPL34 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g24690.1 | LOC_Os09g24690 | component RPL34 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
MA_175574g0010 | No alias | component RPL34 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Pp3c11_2940V3.1 | RPL34, Pp3c11_2940 | Ribosomal protein L34e superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c1_1800V3.1 | RPL34, Pp3c1_1800 | Ribosomal protein L34e superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c25_11980V3.1 | Pp3c25_11980 | Ribosomal protein L34e superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c2_34570V3.1 | Pp3c2_34570 | Ribosomal protein L34e superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c7_21380V3.1 | Pp3c7_21380 | Ribosomal protein L34e superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Sam_g20232 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g44116 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g007560.3.1 | Solyc05g007560 | component RPL34 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g069860.4.1 | Solyc06g069860 | component RPL34 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Spa_g28558 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004116_P001 | Zm00001e004116 | component RPL34 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e021733_P002 | Zm00001e021733 | component RPL34 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034114_P001 | Zm00001e034114 | component RPL34 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e040229_P001 | Zm00001e040229 | component RPL34 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
BP | GO:0006417 | regulation of translation | IEP | HCCA |
BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
MF | GO:0008199 | ferric iron binding | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
MF | GO:0043022 | ribosome binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008195 | Ribosomal_L34Ae | 1 | 94 |
No external refs found! |