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  5. Sam_g14112

Sam_g14112


Description : component *(eIF2-beta) of eIF2 Met-tRNA binding factor complex & original description: none


Gene families : OG0002451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14112

Target Alias Description ECC score Gene Family Method Actions
AT5G20920 EIF2 BETA, EMB1401 eukaryotic translation initiation factor 2 beta subunit 0.03 OrthoFinder output from all 47 species
Aob_g02977 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Azfi_s0063.g035333 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.04 OrthoFinder output from all 47 species
Cba_g18769 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.18 EIF2 BETA, EMB1401 Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Dac_g15241 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
LOC_Os07g48300.1 EIF2 BETA,... component eIF2-beta of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Len_g56294 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.04 OrthoFinder output from all 47 species
Lfl_g04636 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Lfl_g24556 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Mp3g17920.1 EIF2 BETA, EMB1401 component eIF2-beta of eIF2 Met-tRNA binding factor complex 0.02 OrthoFinder output from all 47 species
Spa_g08695 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Spa_g57171 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Zm00001e001571_P003 EIF2 BETA,... component eIF2-beta of eIF2 Met-tRNA binding factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002735 Transl_init_fac_IF2/IF5_dom 151 260
No external refs found!