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  5. Sam_g13227

Sam_g13227


Description : not classified & original description: none


Gene families : OG0002505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13227
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00115090 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00099p00023240 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT4G10000 No alias Thioredoxin family protein 0.07 OrthoFinder output from all 47 species
AT5G03880 No alias Thioredoxin family protein 0.06 OrthoFinder output from all 47 species
Adi_g024496 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g30122 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13665 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g01378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10824 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene35991.t1 Aspi01Gene35991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11179 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.06G069600.1 Ceric.06G069600 not classified & original description: pacid=50619894... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021616.13 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g09741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033851001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os08g44400.1 LOC_Os08g44400 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g19609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g02770.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g09140.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g24726 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g00697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06666 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02768 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g18575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020357 No alias not classified & original description: CDS=1-435 0.04 OrthoFinder output from all 47 species
Solyc09g009820.4.1 Solyc09g009820 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g04178 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g20624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003926_P001 Zm00001e003926 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e008030_P003 Zm00001e008030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022061_P001 Zm00001e022061 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 252 325
IPR004045 Glutathione_S-Trfase_N 133 208
No external refs found!