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  5. Sam_g12934

Sam_g12934


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12934

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00153320 evm_27.TU.AmTr_v1... CASP-like protein 2B1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00037p00155660 evm_27.TU.AmTr_v1... CASP-like protein 2D1 OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
AT4G25830 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G055900.1 Ceric.08G055900 not classified & original description: pacid=50637769... 0.03 OrthoFinder output from all 47 species
Ceric.23G007900.1 Ceric.23G007900 not classified & original description: pacid=50611019... 0.03 OrthoFinder output from all 47 species
Dcu_g02321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010256001 No alias CASP-like protein 2A1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
MA_8167318g0010 No alias CASP-like protein 2BC1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.02 OrthoFinder output from all 47 species
Pir_g48333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007556 No alias not classified & original description: CDS=113-772 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014965 No alias not classified & original description: CDS=570-1202 0.03 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
Spa_g06771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 57 208
No external refs found!