Sam_g12482


Description : E4 polyubiquitination factor *(UAP) & original description: none


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12482

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00125550 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Azfi_s0157.g053832 No alias E4 polyubiquitination factor *(UAP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G080900.1 Ceric.23G080900 E4 polyubiquitination factor *(UAP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g12805 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04951 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24398 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g24569 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g12800.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g43559 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28018 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19653 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024333 No alias E4 polyubiquitination factor *(UAP) & original... 0.05 OrthoFinder output from all 47 species
Spa_g49436 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10516 No alias E4 polyubiquiTination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 429 471
No external refs found!