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  5. Sam_g12052

Sam_g12052


Description : not classified & original description: none


Gene families : OG0001451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12052

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00207790 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G03830 No alias guanylate-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G46070 No alias Guanylate-binding family protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene66801.t1 Aspi01Gene66801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69155.t1 Aspi01Gene69155 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0126.g048649 No alias not classified & original description: CDS=1-2652 0.02 OrthoFinder output from all 47 species
Azfi_s0185.g056605 No alias not classified & original description: CDS=339-3572 0.05 OrthoFinder output from all 47 species
Ceric.03G061100.1 Ceric.03G061100 not classified & original description: pacid=50572331... 0.03 OrthoFinder output from all 47 species
Ceric.33G001500.1 Ceric.33G001500 not classified & original description: pacid=50606915... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000955.23 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020999.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g06625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021121001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01021122001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os02g20410.1 LOC_Os02g20410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g13643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g01230.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g06798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0216.g026042 No alias not classified & original description: CDS=152-2950 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1086.g027942 No alias not classified & original description: CDS=176-2989 0.03 OrthoFinder output from all 47 species
Solyc02g077600.3.1 Solyc02g077600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013971_P003 Zm00001e013971 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR015894 Guanylate-bd_N 43 303
IPR003191 Guanylate-bd/ATL_C 306 605
No external refs found!