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  5. Sam_g11696

Sam_g11696


Description : galacturonosyltransferase & original description: none


Gene families : OG0000478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11696

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00136940 GATL4,... Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.05 OrthoFinder output from all 47 species
AT3G06260 GATL4 galacturonosyltransferase-like 4 0.03 OrthoFinder output from all 47 species
Aev_g12629 GATL3 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01837 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12783 GATL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15792 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22888 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02073 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15519 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00584 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16645.t1 GATL7, Aspi01Gene16645 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015307 GATL7 galacturonosyltransferase & original description: CDS=1-1686 0.02 OrthoFinder output from all 47 species
Dde_g46004 GATL3 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03480 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16699 GLZ1, GATL1,... galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011066001 GATL4 Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01017857001 No alias Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_09765 GATL3 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os06g13760.1 GATL9, LGT8,... galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Lfl_g16401 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_88535g0010 GATL7 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Msp_g01597 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03683 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05769 GATL3 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05770 GATL3 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g27516 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44150 GATL3 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g18339 GATL3 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24913 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45115 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g004971 GATL7 galacturonosyltransferase & original description: CDS=1-1182 0.05 OrthoFinder output from all 47 species
Solyc02g089880.4.1 GATL2, Solyc02g089880 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Solyc04g079860.1.1 GLZ1, GATL1,... galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Solyc09g074080.3.1 GATL4, Solyc09g074080 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Spa_g12644 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47142 GATL7 galacturonosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g19743 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015772_P001 GATL9, LGT8,... galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e036043_P001 GATL9, LGT8,... galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e038370_P001 GATL7, Zm00001e038370 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 167 422
No external refs found!