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  5. Sam_g11516

Sam_g11516


Description : not classified & original description: none


Gene families : OG0001054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001054_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11516

Target Alias Description ECC score Gene Family Method Actions
Adi_g123010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g50159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001254 Trypsin_dom 46 266
No external refs found!