Sam_g11416

Description : adaptor component *(ClpS) of chloroplast Clp-type protease complex & original description: none

Gene families : OG0005952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005952_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g11416

Target	Alias	Description	ECC score	Gene Family Method
Ala_g00971	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Aop_g02009	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Ehy_g03330	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Ehy_g11848	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Lfl_g00995	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Nbi_g00525	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.05	OrthoFinder output from all 47 species
Spa_g46451	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Zm00001e004147_P001	Zm00001e004147	adaptor component ClpS of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030163	protein catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003769	ClpS_core	89	155

External Links

No external refs found!