1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g11368

Sam_g11368


Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0001979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001979_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11368

Target Alias Description ECC score Gene Family Method Actions
Adi_g108238 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01453 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20371 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g26634 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c17_11890V3.1 GMD2, MUR1,... NAD(P)-binding Rossmann-fold superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006121 GMD1 EC_4.2 carbon-oxygen lyase & original description: CDS=127-1179 0.03 OrthoFinder output from all 47 species
Zm00001e036558_P001 GMD2, MUR1,... GDP-D-mannose 4,6-dehydratase (MUR1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004615 phosphomannomutase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 10 324
No external refs found!