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  5. Sam_g11311

Sam_g11311


Description : chaperone *(Hsp70) & original description: none


Gene families : OG0000109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11311

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00199940 BIP, BIP2,... Luminal-binding protein OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00199970 BIP, BIP2,... Luminal-binding protein OS=Solanum lycopersicum 0.05 OrthoFinder output from all 47 species
AMTR_s00137p00032560 Hsp70b External stimuli response.temperature.Hsp... 0.05 OrthoFinder output from all 47 species
Ala_g10616 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09488 AT-HSC70-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001223 BIP1 not classified & original description: CDS=287-2284 0.04 OrthoFinder output from all 47 species
Gb_11391 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
Lfl_g25034 AT-HSC70-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26637 ATHSP70, HSP70 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_160636g0010 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
MA_373237g0010 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
Mp2g08350.1 ATHSP70, HSP70 chaperone (Hsp70) 0.02 OrthoFinder output from all 47 species
Mp4g11410.1 ATHSP70, HSP70 chaperone (Hsp70) 0.02 OrthoFinder output from all 47 species
Pir_g38306 ATHSP70, HSP70 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g082920.4.1 BIP, BIP2, Solyc03g082920 Luminal-binding protein 5 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140662 ATP-dependent protein folding chaperone IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 8 617
No external refs found!