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  5. Sam_g10564

Sam_g10564


Description : not classified & original description: none


Gene families : OG0000728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10564
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Adi_g109193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21630 ATCRE1, WOL,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50096.t1 ATCRE1, WOL,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19061 ATCRE1, WOL,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38373 ATCRE1, WOL,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13841 ATCRE1, WOL,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0145.g022995 ATCRE1, WOL,... not classified & original description: CDS=241-3297 0.03 OrthoFinder output from all 47 species
Sam_g51748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05663 ATCRE1, WOL,... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003594 HATPase_C 635 826
IPR007895 MASE1 344 439
IPR007895 MASE1 28 196
IPR001789 Sig_transdc_resp-reg_receiver 940 1056
IPR003661 HisK_dim/P 523 588
No external refs found!