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  5. Sam_g10411

Sam_g10411


Description : not classified & original description: none


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10411

Target Alias Description ECC score Gene Family Method Actions
AT1G18580 GAUT11 galacturonosyltransferase 11 0.02 OrthoFinder output from all 47 species
AT2G20810 LGT4, GAUT10 galacturonosyltransferase 10 0.03 OrthoFinder output from all 47 species
AT2G38650 GAUT7, LGT7 galacturonosyltransferase 7 0.04 OrthoFinder output from all 47 species
AT3G02350 GAUT9 galacturonosyltransferase 9 0.03 OrthoFinder output from all 47 species
Ala_g07865 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19549 LGT4, GAUT10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14467 GAUT8, QUA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21091 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013513 GAUT9 glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Ceric.03G086500.1 GAUT13, Ceric.03G086500 not classified & original description: pacid=50571381... 0.02 OrthoFinder output from all 47 species
Ceric.21G086200.1 GAUT9, Ceric.21G086200 not classified & original description: pacid=50604007... 0.04 OrthoFinder output from all 47 species
Ceric.32G017500.1 GAUT11, Ceric.32G017500 not classified & original description: pacid=50597293... 0.02 OrthoFinder output from all 47 species
Ehy_g19204 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12937 GAUT11 Probable galacturonosyltransferase 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_39838 GAUT7, LGT7 component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species
LOC_Os06g49810.1 LGT1, GAUT1,... component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species
LOC_Os09g30280.1 GAUT4, LOC_Os09g30280 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g35199 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Ore_g15995 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09889 LGT4, GAUT10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002412 GAUT4 not classified & original description: CDS=1-1242 0.02 OrthoFinder output from all 47 species
Smo111745 GAUT8, QUA1 Galacturonosyltransferase 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo141437 LGT1, GAUT1 Cell wall.pectin.homogalacturonan.synthesis.GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Solyc09g059330.3.1 GAUT8, QUA1,... Galacturonosyltransferase 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g017600.3.1 LGT1, GAUT1,... component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.04 OrthoFinder output from all 47 species
Solyc10g074650.2.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
Zm00001e013325_P003 GAUT3, Zm00001e013325 Probable galacturonosyltransferase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 235 510
No external refs found!