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  5. Sam_g09972

Sam_g09972


Description : not classified & original description: none


Gene families : OG0001865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09972
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00058330 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00058890 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g084061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15296.t1 Aspi01Gene15296 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G023100.1 Ceric.03G023100 not classified & original description: pacid=50572411... 0.04 OrthoFinder output from all 47 species
Dde_g09796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15674 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10434906g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434906g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011678_P001 Zm00001e011678 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR011659 PD40 545 582
IPR011659 PD40 496 530
IPR011659 PD40 176 199
No external refs found!