1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g26346

Lfl_g26346 (ATCXXS1, CXXS1)


Aliases : ATCXXS1, CXXS1

Description : H-type thioredoxin *(Trx-H) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g26346

Target Alias Description ECC score Gene Family Method Actions
AT1G45145 ATH5, ATTRX5, TRX5, LIV1 thioredoxin H-type 5 0.03 OrthoFinder output from all 47 species
AT3G51030 ATTRX1, ATTRX H1, TRX1 thioredoxin H-type 1 0.05 OrthoFinder output from all 47 species
Adi_g028432 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g36349 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44773 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g56283 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Cre05.g248500 TRXH2, TRX2,... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.02 OrthoFinder output from all 47 species
Dcu_g44107 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g58630.1 TRXH2, TRX2,... H-type thioredoxin 0.06 OrthoFinder output from all 47 species
Mp3g04870.1 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin 0.03 OrthoFinder output from all 47 species
Solyc05g006855.1.1 TRXH2, TRX2,... H-type thioredoxin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 26 114
No external refs found!