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  5. Sam_g09602

Sam_g09602


Description : tRNA dihydrouridine synthase & original description: none


Gene families : OG0005712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005712_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09602

Target Alias Description ECC score Gene Family Method Actions
Aop_g15395 No alias tRNA dihydrouridine synthase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36824 No alias tRNA dihydrouridine synthase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G011900.1 Ceric.10G011900 not classified & original description: pacid=50611758... 0.02 OrthoFinder output from all 47 species
Ceric.1Z281600.1 Ceric.1Z281600 tRNA dihydrouridine synthase & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g21462 No alias tRNA dihydrouridine synthase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04721 No alias tRNA dihydrouridine synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g20990.1 LOC_Os04g20990 tRNA dihydrouridine synthase 0.02 OrthoFinder output from all 47 species
Len_g08277 No alias tRNA dihydrouridine synthase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08721 No alias tRNA dihydrouridine synthase & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g06740.1 No alias tRNA dihydrouridine synthase 0.02 OrthoFinder output from all 47 species
Nbi_g30177 No alias tRNA dihydrouridine synthase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g52641 No alias tRNA dihydrouridine synthase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR035587 DUS-like_FMN-bd 90 402
No external refs found!