Sam_g09452

Description : transcriptional regulator *(HsfA1) & original description: none

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g09452

Target	Alias	Description	ECC score	Gene Family Method
AT1G46264	HSFB4, SCZ, AT-HSFB4	heat shock transcription factor B4	0.02	OrthoFinder output from all 47 species
AT4G13980	AT-HSFA5, HSFA5	winged-helix DNA-binding transcription factor family protein	0.02	OrthoFinder output from all 47 species
AT4G19630	No alias	winged-helix DNA-binding transcription factor family protein	0.03	OrthoFinder output from all 47 species
Als_g27612	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene58633.t1	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10318	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g43590.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g54550.1	HSFA4C, RHA1,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Lfl_g03202	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g21014	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g32244	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14485	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06000	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc08g005170.3.1	ATHSFA1D,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.03	OrthoFinder output from all 47 species
Tin_g02653	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g09546	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g45152	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011633_P001	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.03	OrthoFinder output from all 47 species
Zm00001e020490_P001	AT-HSFA6B,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e038685_P001	ATHSF1, HSF1,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009411	response to UV	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	40	129

External Links

No external refs found!

Sam_g09452

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation